Deteksi Gen nuc (nuclease) Bakteri Methicillin Resistant Staphylococcus aureus (MRSA) Pada Sampel Ulkus Diabetikum Metode PCR

Ari Fajar Lestari, Suliati Suliati, Anita Dwi Anggraini

Abstract


Diabetic ulcers represent a common chronic complication of diabetes mellitus (DM) and are frequently associated with infections caused by Staphylococcus aureus. Staphylococcus aureus possesses multiple virulence factors, including the nuc (nuclease) gene, which encodes a thermonuclease enzyme capable of degrading DNA and destroying phagocytes within the host. Methicillin-resistant Staphylococcus aureus (MRSA) is a strain of S. aureus exhibiting resistance to methicillin and other beta-lactam antibiotics. This study used conventional PCR Methode to detect the presence of the nuc (nuclease) gene in MRSA isolates obtained from patients with diabetic ulcers. A descriptive quantitative study with a cross-sectional design was conducted on 30 diabetic ulcer samples collected from Rumah Rawat Luka Surabaya between April and May 2025. Phenotypic identification and antibiotic susceptibility testing were performed, followed by molecular detection of the nuc (nuclease) gene using the conventional PCR method, generating an amplicon of 279 bp. The findings revealed that 19 of the 30 diabetic ulcer swab samples were phenotypically identified as Staphylococcus aureus. Antibiotic susceptibility testing indicated that 6 (31.6%) of these isolates were methicillin-resistant (MRSA). Among the 6 MRSA isolates, 3 (50%) tested positive for the nuc (nuclease) gene. This study emphasizes the application of molecular-based diagnostic methods such as PCR for the rapid detection of MRSA in diabetic ulcers, thereby supporting the selection of appropriate antibiotic therapy and improving the success of clinical management.


Keywords


MRSA; Diabetic Ulcuer; nuc (nuclease); PCR; Virulence; Resistant antibiotic

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References


World Health Organization. WHO Regional Office for Africa. 2023 [cited 2024 Nov 8]. Diabetes. Available from: https://www.who.int/news-room/fact-sheets/detail/diabetes

Magliano DJ, Boyko EJ. IDF Diabetes Atlas 10th edition scientific committee. IDF DIABETES ATLAS [Internet] [Internet]. 10th ed. Brussels: International Diabetes Federation; 2021. Available from: https://pubmed.ncbi.nlm.nih.gov/35914061/

Anugerah A. Buku ajar: Diabetes dan komplikasinya. Guepedia/At, editor. Buku Ajar : Diabetes Dan Komplikasinya. Bojonegoro, Indonesia: Guepedia; 2020.

Rahman IW, Arfani N, Tadoda JV. Deteksi Bakteri MRSA Methicillin-Resistant Staphylococcus aureus pada Sampel Darah Pasien Rawat Inap. J Ilmu Alam dan Lingkung [Internet]. 2023;14(1):48–54. Available from: https://journal.unhas.ac.id/index.php/jai2

Rizqiyah H, Soleha TU, Hanriko R, Apriliana E. Pola Bakteri Ulkus Diabetikum Pada Penderita Diabetes Melitus Bacteriological Profile of Diabetic Foot Ulcer in RSUD Dr . H . Abdul Moeloek. Majority. 2020;9.

Kiedrowski MR, Crosby HA, Hernandez FJ, Malone CL, McNamara JO, Horswill AR. Staphylococcus aureus Nuc2 is a functional, surface-attached extracellular nuclease. PLoS One. 2014;9(4).

Lasmini T, Saphira A, Dos Marliana LB, Sherly Margaretta T. Identifikasi Bakteri Staphylococcus Aureus Pada Swab Rongga Hidung Penjamah Makanan Di Jalan Durian Kota Pekanbaru. Prosaiding AIPLMI. 2022;5:281–92.

Karimzadeh R, Ghassab RK. Identification of nuc nuclease and sea enterotoxin genes in Staphylococcus aureus isolates from nasal mucosa of burn hospital staff: a cross-sectional study. New Microbes New Infect [Internet]. 2022;47:100992. Available from: https://doi.org/10.1016/j.nmni.2022.100992

Khariunnisa R, Soleha TU, Ramadhian MR. Identifikasi dan Uji Resistensi Staphylococcus aureus pada Ulkus Diabetik di Instalasi Penyakit Dalam RSUD Dr. H. Abdul Moeloek. J Agromedicine Unila. 2020;7:1–6.

Kemalaputri DW, Jannah SN, Budiharjo A, Soedarto J. Deteksi MRSA (Methicillin Resistant Staphylococcus aureus) Pada Pasien Rumah Sakit Dengan Metode MALDI-TOF MS dan MULTIPLEX PCR. J Biol. 2017;6(4):51–61.

Sahebnasagh R, Saderi H, Owlia P. The prevalence of resistance to methicillin in staphylococcus aureus strains isolated from patients by PCR Method for detection of mecA and nuc genes. Iran J Public Health. 2014;43(1):84–92.

Sugireng, Rosdarni. Deteksi Gen nuc Isolat Bakteri Staphylococcus aureus dari Pasien Ulkus Diabetikum dengan Metode PCR. Journals Univ Islam Negeri Alauddin Makassar [Internet]. 2021;(November):133–6. Available from: http://journal.uin-alauddin.ac.id/index.php/psb

Azizah SN, Octifani A, Prasetya YA. DETEKSI GEN nuc PADA BAKTERI Staphylococcus aureus DARI PASIEN ULKUS DIABETIKUM DAN POLA SENSITIVITASNYA. Pros Asos Institusi Pendidik Tinggi Teknol Lab Med Indones. 2024;(Dm):450–64.

Olson ME, Nygaard TK, Ackermann L, Watkins RL, Zurek OW, Pallister KB, et al. Staphylococcus aureus nuclease is an SaeRS-dependent virulence factor. Infect Immun [Internet]. 2013;81(4):1316–24. Available from: https://doi.org/10.1128/IAI.01242-12

Hoegh S V., Skov MN, Boye K, Worning P, Jensen TG, Kemp M. Variations in the Staphylococcus aureus-specific nuc gene can potentially lead to misidentification of meticillin-susceptible and -resistant S. aureus. J Med Microbiol [Internet]. 2014;63(PART 7):1020–2. Available from: https://doi.org/10.1099/jmm.0.076638-0

Schaumburg F, Pauly M, Schubert G, Shittu A, Tong S, Leendertz F, et al. Characterization of a novel thermostable nuclease homolog (NucM) in a highly divergent Staphylococcus aureus clade. J Clin Microbiol [Internet]. 2014;52(11):4036–8. Available from: https://doi.org/10.1128/JCM.02327-14

Sulistyowatiningsih, Wijayanti. Christina Destri Wiwis, WijayaHalik. Evaluasi Penyebab Hasil Invalid Pada Pemeriksaan RT-PCR Pasien COVID-19. J SainHealth . 2022;6(1):1–7.

Fitria A, Widiasi DE, Airlangga H. Systematic Literature Review: Prevalensi Methicillin-Resistant Staphylococcus Aureus (Mrsa) Terhadap Infeksi Nosokomial di Beberapa Negara Asia. J Kedokt Komunitas. 2021;9(1):1–8.




DOI: https://doi.org/10.30602/jlk.v9i1.2133

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